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by Mike Vestil 

The Best Amazon FBA Accounting Software For Your Business

Amazon FBA is one of the most successful platforms for starting your own online business.

This business model allows you to sell products on Amazon, with the fulfillment part being taken care of by the commerce giants themselves.

While there are many benefits to using Amazon FBA and making money in your business, one aspect of this business that isn't necessarily as glamorous as others is accounting.

You need a system that will help you keep your accounts in order and make the entire accounting process a lot easier to get this part right. This is where a good Amazon FBA accounting software comes into play.

The right software can adapt to the various aspects of the Amazon business model and provide you with the solutions you need in each instance.

One can use several applications for automating this process, and in this article, we will review some of the best ones on the market. By the end of this article, you will have a good idea of what is available and which can be best suited for your needs.

Let's get right into it.

The Best Amazon FBA Accounting Software For Sellers

Here are the top applications that one can use for a successful and efficient Amazon FBA accounting.


Best Overall For Amazon Fba Accounting Software


QuickBooks is a small business accounting tool that is user-friendly and easy to use. If you want to track sales, expenses, and inventory, Quickbooks is one of your best bets.

Small and growing businesses of all types will find that QuickBooks accounting solutions are beneficial due to their wide range of features and functionality.

You can also find all of your essential information in one place, so everything you need is right where you want it. Your inventory, bank accounts, and invoices are linked to your QuickBooks Online account for easy access.

Free up time for what's essential by automating account updates - QuickBooks takes care of daily accounting activities for you, so you have more time to focus on growing your business.

QuickBooks helps you claim everything you're entitled to with its full suite of tax features, including sales tax tracking.

If you are using multiple devices, QuickBooks online makes it easy to work anywhere, anytime. It's never been easier to access your accounting data on the go.

Key Features

  • Send custom invoices and quotes so that your customers know exactly what they're paying for.
  • Create estimates to send to prospective clients before you start work so that you can get paid even faster.
  • Your account information is kept in the cloud and accessible from any of your devices.
  • Bank-level security to protect your business and its data mean that you can rest assured that your business is safe.



QuickBooks offers these pricing packages:

AccountEdge Pro

Best For Tracking Recurring Subscriptions In Your Business


AccountEdge Pro is a robust accounting solution meant for users looking to do their accounting more professionally.

It is considered one of the best options for those looking for an affordable option that provides a lot of functionality.

With this powerful small business accounting software, it's easy to manage, track and organize your business information.

AccountEdge Pro allows you to keep track of your revenue, expenses, and financial objectives by managing your banking and inventory and providing tools for creating invoices, quotes, and sales orders.

If you want to set up your recurring transactions, you can also do so with this software.

With departments and profit centers within the software, it is easy to create a customized view of your business that provides you with the specific information you need to manage your business effectively.

In addition to having a full suite of tools for managing your business, AccountEdge Pro is also easy-to-use and offers excellent support through their website.

Key Features

  • Take advantage of AccountEdge's powerful features to simplify your bookkeeping tasks and streamline your workflow.
  • Create journal entries with a single click; no need to manually enter data from source documents such as invoices, sales receipts, and checks.
  • Secure your essential business information by backing up your company files.
  • Track company mileage to comply with regulations and ensure reimbursement.




Best For Those Looking For Software Customization


AccountingSuite can be customized to suit your increasing firm's needs and works in the cloud to access your data from anywhere.

It is an excellent option for those who need a professional and customizable solution that works on many platforms and devices.

By connecting to your bank accounts, AccountingSuite Pro also enables you to monitor your business's cash flow.

This software has advanced inventory tools that enable you to plan, sell and manage your items more effectively.

With AccountingSuite, you can also track your company's actual transactions and account balances with easy-to-use financial reports.

Stay connected with AccountingSuite's real-time payroll module, allowing you to accurately pay your employees and stay in touch with them even when they are away from the office.

With time tracking features, it's also possible to monitor your employees' time and productivity based on the tasks that they are working on.

Key Features

  • Accounting software that you can customize to suit your needs means that you'll always have control of your accounting software.
  • Cloud accounting capabilities ensure that you can access your data from anywhere.
  • Inventory management is made efficient with the option of planning, selling, and managing items more effectively.
  • With powerful financial reports that are easy to use, you'll be able to monitor your business's performance at all times.



There are four different options to choose from, so you are bound to find one that works for your business.


Best For Creating Accounting Automations In Your Business


Taxomate is great for those that want to automate their accounting processes.

You can create reports with built-in templates to help you quickly prepare your bookkeeping tasks or tax filing, and this software will automate your entire workflow.

Taxomate connects your eCommerce seller accounts to sync your orders, shipments, and inventory updates.

It also compiles all transactions into tax reports that you can send to your accountant or upload to tax agencies.

Taxomate calculates all the actual sales, payroll, and VAT tax information you need to file or report.

The automated accounting functionality creates invoices, sales receipts, purchase orders, tracks inventory, etc.

With unlimited accounts and marketplaces, the software is excellent for small and large operations.

You can also try the software for free to see if it meets your requirements.

Key Features

  • With all Amazon Marketplaces supported, Taxomate makes it easy to manage your accounting across all your online accounts.
  • The built-in invoice templates allow you to easily create invoices for your business's suppliers, customers, and employees.
  • Tacoma can receive payments from Amazon Payouts, so you may use it to import Amazon Payouts into Taxomate automatically.
  • Send invoices to the right accounting software so that you can start saving time on your bookkeeping tasks or tax filing.
  • Reconcile with Amazon Payment in just one click so that you can keep your finances in order.



Pricing is based on the number of monthly orders you experience


Best For Simplifying The Whole Accounting Process


Xero simplifies your accounting by organizing all your financial data into one place.

This software organizes your entire accounting process, so you can easily see where you stand financially at any given time.

From invoicing to payroll, Xero covers all the bases for managing your business's finances.

With eCommerce, everyday accounting tasks are quick and easy.

The intuitive interface provides a streamlined workflow so that you can manage accounts payable, inventory, sales orders, and more without hassle.

Xero's 'one step at a time' approach to accounting is designed with simplicity in mind.

This software is easy to learn and quick to master for bookkeepers or accountants new to working with Xero.

The software provides a full suite of financial reports so that you can discover more about the performance of your business without wasting time on data compilation.

Pay bills, track expenses, identify trends, manage inventory and create automated tax reports to make your work easier.

Get an overview of your business's financial performance with personalized reports and analytics.

Key Features

  • Track all your projects to keep your finances in order.
  • Record hours worked and costs spent on the job to get paid faster and reduce your accounting workload.
  • You may create invoices, track the status of outstanding checks or pay bills.
  • You can use their specialized payroll software to calculate pay and deductions, pay staff, and update the Xero accounts.
  • Easily reconcile bank transactions in a few clicks, ensuring that you know exactly where you stand.



There are three pricing plans for Xero:


Best For Integrating With Popular Business Software


FreshBooks was designed for eCommerce owners to create and send estimates, invoices, track expenses, look up past transactions, and more.

It was also designed for small businesses that need an easy way to stay organized.

With integrations that keep your business moving forward, FreshBooks is just what you need to streamline your business.

To help you organize your business and handle client payments, FreshBooks works with over 100 applications that can help take your business to the next level.

With the ability to pick templates and customize invoices, you can create beautiful documents that stand out from your competition.

Send automatic payment reminders to clients that pay late, simplifying the administrative tasks and allowing you to focus on what matters most.

Key Features

  • With the “due dates” feature, you can get reminded when a payment is due and overdue.
  • You may set up recurring invoices, track expenses, and monitor time spent on jobs.
  • You can also accept credit cards for faster payments and create estimates that convert into invoices.
  • Keep all of your paperwork in one location so that you can get paid faster.
  • Apply discounts to invoices so that you can give your clients the best deals.



The following are the four plans with Freshbooks:

What Does Amazon FBA Accounting Software Do?

Many entrepreneurs choose the Amazon FBA business model to build a sustainable online business from home.

However, one must have the tools needed to track your expenses and profits before getting started.

The best accounting software will allow you to work from anywhere you want, as long as there is a computer and an internet connection, while ensuring that everything remains on point.

These tools will help entrepreneurs track the status of their shipments, receive payments from Amazon via email, and manage expenses.

How To Choose Your Amazon Accounting Software

Various features are needed to ensure that the software you use helps your Amazon business run smoothly.

Here's a list of essential factors to consider when settling on the right software for you.

User Management

While small business owners may be tempted to purchase a single software package, it's better if the software can manage multiple users. This is useful for monitoring costs and expenses.

As your business grows, you will likely hire more people to help with the day-to-day activities of running an Amazon business, and software that has inbuilt user management will facilitate your business operations.

Security And Permissions

The best accounting software provides password protection and security protocols that protect sensitive data.

Some of this protection includes encryption and access permissions.

The more secure the software, the better it is for your business, given that you will be handling both personal information and your company's finances.

If a security breach occurs, the financial repercussions could negatively impact your bottom line.

Multi-Currency Support

You should aim to sell on international marketplaces, so make sure your accounting software allows multi-currency transactions.  

This means that you can enter the relevant figures, such as product costs, which are then automatically converted into the desired currency.

Reports And Dashboards

Compared to older versions of accounting software, current systems have more advanced reports and helpful insights.

These include real-time analytics to help monitor working capital, cash flow forecasts, expense breakdowns by project or department, customer performance reports for billing purposes, and tax filing tools.

Ensure that your software includes easy-to-use reporting features, so everything is clear at a glance. This will allow you to monitor essential business data without spending too much time creating custom reports.

Customer Support

Good customer support should be a priority when choosing an accounting tool for Amazon.

Getting help when you need it is crucial for both short and long-term success. The last thing you want is having to dive deep into documentation, trying to find a solution to a simple problem you have.

The right customer support team will help you cut to the chase in an instant, and are usually totally worth the fee you pay.

Budgeting Features

One great feature to look for in Amazon accounting software is creating budgets and monitoring spending. This can be particularly helpful when you need to know your monthly expenses, revenue, and profitability during a specific period.

With this information at hand, it's easier to make informed decisions about how much money needs to be set aside each month for fixed costs, variable costs, tax bills, and other expenses.

Cloud-Based Accounting Software

The right accounting software for Amazon business owners should be cloud-based.

This means that your data is stored online and accessible from any computer or mobile device. The advantage of this is that you can access all company records no matter where you are located.

You can also manage business finances from wherever you happen to be, without the hassle of installing accounting software on every device.


While free accounting software is available, you will probably have to pay a monthly or yearly fee if you want to upgrade.

This is because free products typically lack the advanced features of their premium counterparts, including inventory management, billing, and invoicing tools.

There is also software for Amazon sellers that has a one-time fee. Sometimes this might make sense to consider if you only sell on Amazon occasionally or plan to do this for a short period.

Ability For Tracking Sales Tax

When working with Amazon, you must keep track of state sales tax requirements.

Many regions have laws regarding how, when, and where out-of-state sellers are exempt from collecting these taxes. A good accounting software package will help you stay informed about tax changes or new laws in your area.

A sales tax calculation feature is also helpful because you can ensure that your customers are being charged the correct amount for sales tax.

While sales tax calculations are automatic with some Amazon accounting software, you may have to enter this information manually if your situation requires it.

Also, understanding sales tax collected versus sales tax owed will make it easier to plan for future tax bills and be more prepared when they are due.

A Focus On eCommerce

While online bookkeeping and accounting tools are commonplace now, some programs are more geared toward eCommerce than others.

eCommerce businesses typically need to keep inventory, create and send invoices, manage product sales, and more.  

Since Amazon businesses must abide by specific laws regarding online sales, tracking these details is essential.

The ability to enter custom amounts for weight or volume can also be helpful if your products require special treatment during transit.

Integrations With Third-Party Platforms

Since there is a range of other platforms and apps that work with Amazon businesses, you should take a look and see what type of integrations your accounting software has.

Many accounting programs have an open API, which means you can access your data directly from popular platforms without having to leave their interface.


The right Amazon FBA accounting software will make your life easier by making it easy to track expenses, revenue, and profits.

Having the proper business accounting calculations at your fingertips will help you adjust inventory, plan for future expenses and see a snapshot of how your business is doing at all times.

If you need a reliable accounting program for your Amazon businesses, be sure to keep in mind the above features to help you select the right software for your needs.

Keep reading on MikeVestil.com: If you’re ready to get started with Amazon FBA, check out my post on how to create an Amazon FBA business with little money.

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About the author 

Mike Vestil

Mike Vestil is the author of the Lazy Man's Guide To Living The Good Life. He also has a YouTube channel with over 700,000 subscribers where he talks about personal development and personal finance.

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